brain entropy mapping toolbox Search Results


jülich cytoarchitectonic probabilistic atlas  (Forschungszentrum gmbh)
90
Forschungszentrum gmbh jülich cytoarchitectonic probabilistic atlas
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Jülich Cytoarchitectonic Probabilistic Atlas, supplied by Forschungszentrum gmbh, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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brain entropy mapping toolbox  (MathWorks Inc)
96
MathWorks Inc brain entropy mapping toolbox
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Brain Entropy Mapping Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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network-based statistic connectome matlab package  (MathWorks Inc)
90
MathWorks Inc network-based statistic connectome matlab package
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Network Based Statistic Connectome Matlab Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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function interp2 with option cubic  (MathWorks Inc)
90
MathWorks Inc function interp2 with option cubic
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Function Interp2 With Option Cubic, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ibaspm toolbox  (MathWorks Inc)
90
MathWorks Inc ibaspm toolbox
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Ibaspm Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab connectomics analysis  (MathWorks Inc)
90
MathWorks Inc matlab connectomics analysis
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Matlab Connectomics Analysis, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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econnectome (electrophysiological connectome)  (MathWorks Inc)
90
MathWorks Inc econnectome (electrophysiological connectome)
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Econnectome (Electrophysiological Connectome), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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statistical parametric mapping brain image analysis toolkit  (MathWorks Inc)
90
MathWorks Inc statistical parametric mapping brain image analysis toolkit
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Statistical Parametric Mapping Brain Image Analysis Toolkit, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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network-based statistic (nbs) connectome matlab package  (MathWorks Inc)
93
MathWorks Inc network-based statistic (nbs) connectome matlab package
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Network Based Statistic (Nbs) Connectome Matlab Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab r2022a  (MathWorks Inc)
90
MathWorks Inc matlab r2022a
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Matlab R2022a, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab r2014b  (MathWorks Inc)
90
MathWorks Inc matlab r2014b
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Matlab R2014b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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brain entropy mapping toolbox (bentbx  (MathWorks Inc)
90
MathWorks Inc brain entropy mapping toolbox (bentbx
Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a <t>cytoarchitectonic</t> atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .
Brain Entropy Mapping Toolbox (Bentbx, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a cytoarchitectonic atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .

Journal: Frontiers in Neurology

Article Title: A Thalamic-Fronto-Parietal Structural Covariance Network Emerging in the Course of Recovery from Hand Paresis after Ischemic Stroke

doi: 10.3389/fneur.2015.00211

Figure Lengend Snippet: Spatial topography of longitudinal structural covariance network correlating with hand function recovery . (A) shows the six largest clusters of supra-threshold voxels for the second principal component (PC2 TBM ) projected onto a standard three dimensional brain and onto a cytoarchitectonic atlas (cluster 3+) in MNI space. Clusters are labeled according to their (positive or negative) correlation with gray matter volume expansion in the medio-dorsal thalamus. The threshold for positive clusters corresponds to the first percentile of voxel values (absolute value 0.0064), the threshold for the negative cluster to the ninety-ninth percentile (absolute value 0.0095). (B) shows the spatial relationship between the covariance network clusters and lesion maps of patient subgroups. Color-coded contours define areas with ≥20% lesion probability in each subgroup. Size, localization, cytoarchitectonic assignment, and functional correlates of the individual clusters are summarized in Table .

Article Snippet: These clusters were localized using the Jülich cytoarchitectonic probabilistic atlas (SPM Anatomy toolbox, Version 1.8, made available through the Human Brain Mapping division at the Forschungszentrum Jülich at http://www.fz-juelich.de/inm/inm-1/DE/Forschung/_docs/SPMAnatomyToolbox/SPMAnatomyToolbox_node.html ).

Techniques: Labeling, Functional Assay

Clusters of the longitudinal structural covariance network (PC2 TBM ) related to hand function recovery: size, localization, cytoarchitectonic assignment, and functional correlates .

Journal: Frontiers in Neurology

Article Title: A Thalamic-Fronto-Parietal Structural Covariance Network Emerging in the Course of Recovery from Hand Paresis after Ischemic Stroke

doi: 10.3389/fneur.2015.00211

Figure Lengend Snippet: Clusters of the longitudinal structural covariance network (PC2 TBM ) related to hand function recovery: size, localization, cytoarchitectonic assignment, and functional correlates .

Article Snippet: These clusters were localized using the Jülich cytoarchitectonic probabilistic atlas (SPM Anatomy toolbox, Version 1.8, made available through the Human Brain Mapping division at the Forschungszentrum Jülich at http://www.fz-juelich.de/inm/inm-1/DE/Forschung/_docs/SPMAnatomyToolbox/SPMAnatomyToolbox_node.html ).

Techniques: Functional Assay, Transformation Assay